2021
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Journal Articles
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Bilginer, Rumeysa ; Ozkendir-Inanc, Dilce ; Yildiz, Umit Hakan ; Arslan-Yildiz, Ahu Biocomposite scaffolds for 3D cell culture: Propolis enriched polyvinyl alcohol nanofibers favoring cell adhesion Journal Article Journal of Applied Polymer Science, 2021. BibTeX @article{bilginer2021biocomposite,
title = {Biocomposite scaffolds for 3D cell culture: Propolis enriched polyvinyl alcohol nanofibers favoring cell adhesion},
author = {Bilginer, Rumeysa and Ozkendir-Inanc, Dilce and Yildiz, Umit Hakan and Arslan-Yildiz, Ahu},
year = {2021},
date = {2021-01-01},
journal = {Journal of Applied Polymer Science},
keywords = {},
pubstate = {published},
tppubtype = {article}
}
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2020
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Journal Articles
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Karadas, Ozge ; Mese, Gulistan ; Ozcivici, Engin Low magnitude high frequency vibrations expedite the osteogenesis of bone marrow stem cells on paper based 3D scaffolds Journal Article Biomedical Engineering Letters, 2020. BibTeX @article{karadas2020low,
title = {Low magnitude high frequency vibrations expedite the osteogenesis of bone marrow stem cells on paper based 3D scaffolds},
author = {Karadas, Ozge and Mese, Gulistan and Ozcivici, Engin},
year = {2020},
date = {2020-08-01},
journal = {Biomedical Engineering Letters},
keywords = {},
pubstate = {published},
tppubtype = {article}
}
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Baskan Oznur; Karadas, Ozge; Mese Gulistan; Ozcivici Engin Applicability of Low-intensity Vibrations as a Regulatory Factor on Stem and Progenitor Cell Populations Journal Article Current Stem Cell Research & Therapy, 15 , 2020. BibTeX @article{baskan2020applicability,
title = {Applicability of Low-intensity Vibrations as a Regulatory Factor on Stem and Progenitor Cell Populations},
author = {Baskan, Oznur; Karadas, Ozge; Mese, Gulistan; Ozcivici, Engin},
year = {2020},
date = {2020-07-01},
journal = {Current Stem Cell Research & Therapy},
volume = {15},
keywords = {},
pubstate = {published},
tppubtype = {article}
}
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Aydogan, Fadime ; Baykan, Sura ; Soliman, Gamal A; Yusufoglu, Hasan ; Bedir, Erdal Evaluation of the potential aphrodisiac activity of sesquiterpenoids from roots of Ferula huber-morathii Peşmen in male rats Journal Article Journal of ethnopharmacology, 257 , pp. 112868, 2020. BibTeX @article{aydogan2020evaluation,
title = {Evaluation of the potential aphrodisiac activity of sesquiterpenoids from roots of Ferula huber-morathii Peşmen in male rats},
author = {Aydogan, Fadime and Baykan, Sura and Soliman, Gamal A and Yusufoglu, Hasan and Bedir, Erdal},
year = {2020},
date = {2020-01-01},
journal = {Journal of ethnopharmacology},
volume = {257},
pages = {112868},
keywords = {},
pubstate = {published},
tppubtype = {article}
}
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Gunbatan, Tugba ; Gurbuz, Ilhan ; Bedir, Erdal ; Ozkan, Ayse Mine Gençler ; Ozcinar, Ozge Investigations on the anti-ulcerogenic activity of Sideritis caesarea H. Duman, Aytaç & Başer Journal Article Journal of ethnopharmacology, 258 (112920), 2020. BibTeX @article{gunbatan2020investigations,
title = {Investigations on the anti-ulcerogenic activity of Sideritis caesarea H. Duman, Aytaç & Başer},
author = {Gunbatan, Tugba and Gurbuz, Ilhan and Bedir, Erdal and Ozkan, Ayse Mine Gençler and Ozcinar, Ozge},
year = {2020},
date = {2020-01-01},
journal = {Journal of ethnopharmacology},
volume = {258},
number = {112920},
keywords = {},
pubstate = {published},
tppubtype = {article}
}
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Genç, Rükan ; Yakubogullari, Nilgun ; Nalbantsoy, Ayse ; Coven, Fethiye ; Bedir, Erdal Adjuvant potency of Astragaloside VII embedded cholesterol nanoparticles for H3N2 influenza vaccine Journal Article Turkish Journal of Biology, 44 (5), pp. 304–314, 2020. BibTeX @article{gencc2020adjuvant,
title = {Adjuvant potency of Astragaloside VII embedded cholesterol nanoparticles for H3N2 influenza vaccine},
author = {Genç, Rükan and Yakubogullari, Nilgun and Nalbantsoy, Ayse and Coven, Fethiye and Bedir, Erdal},
year = {2020},
date = {2020-01-01},
journal = {Turkish Journal of Biology},
volume = {44},
number = {5},
pages = {304--314},
keywords = {},
pubstate = {published},
tppubtype = {article}
}
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Uner, Goklem ; Tag, Ozgur ; Erzurumlu, Yalcin ; Kirmizibayrak, Petek Ballar ; Bedir, Erdal Identification of a Noncanonical Necrotic Cell Death Triggered via Enhanced Proteolysis by a Novel Sapogenol Derivative Journal Article Chemical Research in Toxicology, 33 (11), pp. 2880–2891, 2020. BibTeX @article{uner2020identification,
title = {Identification of a Noncanonical Necrotic Cell Death Triggered via Enhanced Proteolysis by a Novel Sapogenol Derivative},
author = {Uner, Goklem and Tag, Ozgur and Erzurumlu, Yalcin and Kirmizibayrak, Petek Ballar and Bedir, Erdal},
year = {2020},
date = {2020-01-01},
journal = {Chemical Research in Toxicology},
volume = {33},
number = {11},
pages = {2880--2891},
keywords = {},
pubstate = {published},
tppubtype = {article}
}
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Baslar, Semih M; Sakalli, Tugce ; Guralp, Gulce ; Dogru, Ekin Kestevur ; Hakli, Emre ; Surmeli, Nur Basak Development of an improved Amplex Red peroxidation activity assay for screening cytochrome P450 variants and identification of a novel mutant of the thermophilic CYP119 Journal Article JBIC Journal of Biological Inorganic Chemistry, 25 (7), pp. 949–962, 2020. BibTeX @article{bacslar2020development,
title = {Development of an improved Amplex Red peroxidation activity assay for screening cytochrome P450 variants and identification of a novel mutant of the thermophilic CYP119},
author = {Baslar, M Semih and Sakalli, Tugce and Guralp, Gulce and Dogru, Ekin Kestevur and Hakli, Emre and Surmeli, Nur Basak},
year = {2020},
date = {2020-01-01},
journal = {JBIC Journal of Biological Inorganic Chemistry},
volume = {25},
number = {7},
pages = {949--962},
keywords = {},
pubstate = {published},
tppubtype = {article}
}
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Bostan, Fatmanur ; Surmeli, Nur Basak Cloning, expression, and characterization of a novel sericin-like protein Journal Article Biotechnology and Applied Biochemistry, 2020. BibTeX @article{bostan2020cloning,
title = {Cloning, expression, and characterization of a novel sericin-like protein},
author = {Bostan, Fatmanur and Surmeli, Nur Basak},
year = {2020},
date = {2020-01-01},
journal = {Biotechnology and Applied Biochemistry},
keywords = {},
pubstate = {published},
tppubtype = {article}
}
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Adak, Asli; Unal, Yagmur Ceren; Yucel, Simge; Vural, Zehra; Turan, Fatma Basak; Yalcin-Ozuysal, Ozden; Ozcivici, Engin; Mese, Gulistan Connexin 32 induces pro-tumorigenic features in MCF10A normal breast cells and MDA-MB-231 metastatic breast cancer cells Journal Article Biochimica et Biophysica Acta (BBA) - Molecular Cell Research, 2020. BibTeX @article{ADAK2020118851,
title = {Connexin 32 induces pro-tumorigenic features in MCF10A normal breast cells and MDA-MB-231 metastatic breast cancer cells},
author = {Asli Adak and Yagmur Ceren Unal and Simge Yucel and Zehra Vural and Fatma Basak Turan and Ozden Yalcin-Ozuysal and Engin Ozcivici and Gulistan Mese},
year = {2020},
date = {2020-01-01},
journal = {Biochimica et Biophysica Acta (BBA) - Molecular Cell Research},
keywords = {},
pubstate = {published},
tppubtype = {article}
}
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Kecili, Seren ; Tekin, Cumhur H Adhesive bonding strategies to fabricate high-strength and transparent 3D printed microfluidic device Journal Article Biomicrofluidics, 2020. BibTeX @article{Kecili2020,
title = {Adhesive bonding strategies to fabricate high-strength and transparent 3D printed microfluidic device},
author = {Kecili, Seren and Tekin, H. Cumhur},
year = {2020},
date = {2020-01-01},
journal = {Biomicrofluidics},
keywords = {},
pubstate = {published},
tppubtype = {article}
}
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Yaman, Sena ; Tekin, Cumhur H Magnetic Susceptibility-Based Protein Detection Using Magnetic Levitation Journal Article Analytical Chemistry, 2020. BibTeX @article{Yaman2020,
title = {Magnetic Susceptibility-Based Protein Detection Using Magnetic Levitation},
author = {Yaman, Sena and Tekin, H Cumhur},
year = {2020},
date = {2020-01-01},
journal = {Analytical Chemistry},
keywords = {},
pubstate = {published},
tppubtype = {article}
}
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Goelzer, Matthew ; Dudakovic, Amel ; Olcum, Melis ; Sen, Buer ; Ozcivici, Engin ; Rubin, Janet ; van Wijnen, Andre J; Uzer, Gunes Lamin A/C functions independently from mechanical signaling during adipogenesis Journal Article bioRxiv, 2020. BibTeX @article{Goelzer2020.09.07.279828,
title = {Lamin A/C functions independently from mechanical signaling during adipogenesis},
author = {Goelzer, Matthew and Dudakovic, Amel and Olcum, Melis and Sen, Buer and Ozcivici, Engin and Rubin, Janet and van Wijnen, Andre J and Uzer, Gunes},
year = {2020},
date = {2020-01-01},
journal = {bioRxiv},
keywords = {},
pubstate = {published},
tppubtype = {article}
}
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Tekin, Cumhur H Kronik Hastaların Uzaktan İzlemine Yönelik Teletıp Platformu Journal Article Dokuz Eylül Üniversitesi Mühendislik Fakültesi Fen ve Mühendislik Dergisi, 2020. BibTeX @article{Tekin2020,
title = {Kronik Hastaların Uzaktan İzlemine Yönelik Teletıp Platformu},
author = {Tekin, H Cumhur},
year = {2020},
date = {2020-01-01},
journal = {Dokuz Eylül Üniversitesi Mühendislik Fakültesi Fen ve Mühendislik Dergisi},
keywords = {},
pubstate = {published},
tppubtype = {article}
}
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Koksal, Busra ; Onbas, Rabia ; Baskurt, Mehmet ; Sah{i}n, Hasan ; Yildiz, Ahu Arslan ; Yildiz, Umit Hakan Boosting up printability of biomacromolecule based bio-ink by modulation of hydrogen bonding pairs Journal Article Koksal, Busra and Onbas, Rabia and Baskurt, Mehmet and Sah{i}n, Hasan and Yildiz, Ahu Arslan and Yildiz, Umit Hakan, 2020. BibTeX @article{koksal2020boosting,
title = {Boosting up printability of biomacromolecule based bio-ink by modulation of hydrogen bonding pairs},
author = {Koksal, Busra and Onbas, Rabia and Baskurt, Mehmet and Sah{i}n, Hasan and Yildiz, Ahu Arslan and Yildiz, Umit Hakan},
year = {2020},
date = {2020-01-01},
journal = {Koksal, Busra and Onbas, Rabia and Baskurt, Mehmet and Sah{i}n, Hasan and Yildiz, Ahu Arslan and Yildiz, Umit Hakan},
keywords = {},
pubstate = {published},
tppubtype = {article}
}
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Arica, Tugce A; Guzelgulgen, Meltem ; Yildiz, Ahu Arslan ; Demir, Mustafa M Electrospun GelMA fibers and p (HEMA) matrix composite for corneal tissue engineering Journal Article Materials Science and Engineering: C, 2020. BibTeX @article{arica2021electrospun,
title = {Electrospun GelMA fibers and p (HEMA) matrix composite for corneal tissue engineering},
author = {Arica, Tugce A and Guzelgulgen, Meltem and Yildiz, Ahu Arslan and Demir, Mustafa M},
year = {2020},
date = {2020-01-01},
journal = {Materials Science and Engineering: C},
keywords = {},
pubstate = {published},
tppubtype = {article}
}
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Ozefe, Fatih ; Yildiz, Ahu Arslan Smartphone-assisted Hepatitis C detection assay based on magnetic levitation Journal Article Analyst, 2020. BibTeX @article{ozefe2020smartphone,
title = {Smartphone-assisted Hepatitis C detection assay based on magnetic levitation},
author = {Ozefe, Fatih and Yildiz, Ahu Arslan},
year = {2020},
date = {2020-01-01},
journal = {Analyst},
keywords = {},
pubstate = {published},
tppubtype = {article}
}
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Bilginer, Rumeysa ; Yildiz, Ahu Arslan A facile method to fabricate propolis enriched biomimetic PVA architectures by co-electrospinning Journal Article Materials Letters, 2020. BibTeX @article{bilginer2020facile,
title = {A facile method to fabricate propolis enriched biomimetic PVA architectures by co-electrospinning},
author = {Bilginer, Rumeysa and Yildiz, Ahu Arslan},
year = {2020},
date = {2020-01-01},
journal = {Materials Letters},
keywords = {},
pubstate = {published},
tppubtype = {article}
}
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Inproceedings
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Cinel, Gokturk ; Tarim, Alperay E; Tekin, Cumhur H Wearable respiratory rate sensor technology for diagnosis of sleep apnea Inproceedings TIPTEKNO 2020 - Tip Teknolojileri Kongresi - 2020 Medical Technologies Congress, TIPTEKNO 2020, 2020, ISBN: 9781728180731. BibTeX @inproceedings{Cinel2020,
title = {Wearable respiratory rate sensor technology for diagnosis of sleep apnea},
author = {Cinel, Gokturk and Tarim, E. Alperay and Tekin, H. Cumhur},
isbn = {9781728180731},
year = {2020},
date = {2020-01-01},
booktitle = {TIPTEKNO 2020 - Tip Teknolojileri Kongresi - 2020 Medical Technologies Congress, TIPTEKNO 2020},
keywords = {},
pubstate = {published},
tppubtype = {inproceedings}
}
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Karakuzu, B; Alperay Tarim, E; Oksuz, C; Cumhur Tekin, H Electromechanical lab-on-a-chip platform for creatinine analysis using automated elisa protocols Inproceedings MicroTAS 2020 - 24th International Conference on Miniaturized Systems for Chemistry and Life Sciences, 2020, ISBN: 9781733419017. BibTeX @inproceedings{Karakuzu2020,
title = {Electromechanical lab-on-a-chip platform for creatinine analysis using automated elisa protocols},
author = {Karakuzu, B. and Alperay Tarim, E. and Oksuz, C. and Cumhur Tekin, H.},
isbn = {9781733419017},
year = {2020},
date = {2020-01-01},
booktitle = {MicroTAS 2020 - 24th International Conference on Miniaturized Systems for Chemistry and Life Sciences},
keywords = {},
pubstate = {published},
tppubtype = {inproceedings}
}
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Delikoyun, Kerem ; Cine, Ersin ; Anil‐Inevi, Muge ; Ozuysal, Mustafa ; Ozcivici, Engin ; Tekin, Huseyin Cumhur Label-Free Viability Analysis By Using Lensless Holographic Microscopy And Deep Convolutional Neural Network. Inproceedings International Artificial Intelligence in Health Congress, 2020. BibTeX @inproceedings{Delikoyun2020,
title = {Label-Free Viability Analysis By Using Lensless Holographic Microscopy And Deep Convolutional Neural Network.},
author = {Delikoyun, Kerem and Cine, Ersin and Anil‐Inevi, Muge and Ozuysal, Mustafa and Ozcivici, Engin and Tekin, Huseyin Cumhur},
year = {2020},
date = {2020-01-01},
booktitle = {International Artificial Intelligence in Health Congress},
keywords = {},
pubstate = {published},
tppubtype = {inproceedings}
}
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Yılmaz, Esra ; Tekin, Huseyin Cumhur Modeling of Magnetic Levitation Based Microfluidic Cell Sorting System. Inproceedings 3rd Workshop on Modelling of Biological Cells, Fluid Flow and Microfluidics, 2020. BibTeX @inproceedings{Ylmaz2020,
title = {Modeling of Magnetic Levitation Based Microfluidic Cell Sorting System.},
author = {Yılmaz, Esra and Tekin, Huseyin Cumhur},
year = {2020},
date = {2020-01-01},
booktitle = {3rd Workshop on Modelling of Biological Cells, Fluid Flow and Microfluidics},
keywords = {},
pubstate = {published},
tppubtype = {inproceedings}
}
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Delikoyun, Kerem ; Kecili, Seren ; Tekin, Cumhur H Nanoparticle Detection with Portable and Low-Cost Lensless Holographic Microscopy Platform Inproceedings 2020 28th Signal Processing and Communications Applications Conference (SIU), 2020, ISBN: 1728172063. BibTeX @inproceedings{Delikoyun2020a,
title = {Nanoparticle Detection with Portable and Low-Cost Lensless Holographic Microscopy Platform},
author = {Delikoyun, Kerem and Kecili, Seren and Tekin, H Cumhur},
isbn = {1728172063},
year = {2020},
date = {2020-01-01},
booktitle = {2020 28th Signal Processing and Communications Applications Conference (SIU)},
keywords = {},
pubstate = {published},
tppubtype = {inproceedings}
}
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Sarigil, Oyku ; Anil-Inevi, Muge ; Yilmaz, Esra ; Ozcelik, Ozge ; Mese, Gulistan ; Tekin, Cumhur H; Ozcivici, Engin Magnetic levitation-based adipose tissue engineering using horizontal magnet deployment Inproceedings 2020 Medical Technologies Congress (TIPTEKNO), 2020, ISBN: 1728180732. BibTeX @inproceedings{Sarigil2020,
title = {Magnetic levitation-based adipose tissue engineering using horizontal magnet deployment},
author = {Sarigil, Oyku and Anil-Inevi, Muge and Yilmaz, Esra and Ozcelik, Ozge and Mese, Gulistan and Tekin, H Cumhur and Ozcivici, Engin},
isbn = {1728180732},
year = {2020},
date = {2020-01-01},
booktitle = {2020 Medical Technologies Congress (TIPTEKNO)},
keywords = {},
pubstate = {published},
tppubtype = {inproceedings}
}
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Anil-Inevi, Muge ; Unal, Yagmur Ceren ; Yaman, Sena ; Tekin, Cumhur H; Mese, Gulistan ; Ozcivici, Engin Assessment of cell cycle and viability of magnetic levitation assembled cellular structures Inproceedings 2020 Medical Technologies Congress (TIPTEKNO), 2020, ISBN: 1728180732. BibTeX @inproceedings{Anil-Inevi2020,
title = {Assessment of cell cycle and viability of magnetic levitation assembled cellular structures},
author = {Anil-Inevi, Muge and Unal, Yagmur Ceren and Yaman, Sena and Tekin, H Cumhur and Mese, Gulistan and Ozcivici, Engin},
isbn = {1728180732},
year = {2020},
date = {2020-01-01},
booktitle = {2020 Medical Technologies Congress (TIPTEKNO)},
keywords = {},
pubstate = {published},
tppubtype = {inproceedings}
}
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Incollections
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Anil-Inevi, Muge ; Sarigil, Oyku ; Kizilkaya, Melike ; Mese, Gulistan ; Tekin, Cumhur H; Ozcivici, Engin Stem Cell Culture Under Simulated Microgravity Incollection Cell Biology and Translational Medicine, 10 , 2020. BibTeX @incollection{Anil-Inevi2020b,
title = {Stem Cell Culture Under Simulated Microgravity},
author = {Anil-Inevi, Muge and Sarigil, Oyku and Kizilkaya, Melike and Mese, Gulistan and Tekin, H Cumhur and Ozcivici, Engin},
year = {2020},
date = {2020-01-01},
booktitle = {Cell Biology and Translational Medicine},
volume = {10},
keywords = {},
pubstate = {published},
tppubtype = {incollection}
}
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2019
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Journal Articles
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Aslantas, Yaprak; Surmeli, Nur Basak Effects of N-Terminal and C-Terminal Polyhistidine Tag on the Stability and Function of the Thermophilic P450 CYP119 Journal Article Bioinorganic Chemistry and Applications, 2019 , 2019. BibTeX @article{aslantas2019effects,
title = {Effects of N-Terminal and C-Terminal Polyhistidine Tag on the Stability and Function of the Thermophilic P450 CYP119},
author = {Yaprak Aslantas and Nur Basak Surmeli},
year = {2019},
date = {2019-01-01},
journal = {Bioinorganic Chemistry and Applications},
volume = {2019},
publisher = {Hindawi},
keywords = {},
pubstate = {published},
tppubtype = {article}
}
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i, Hatice K{i}z; ç, Melis Kü; Duman, Seda; Bedіr, Erdal Flavonol glycosides from Reseda lutea L Journal Article Phytochemistry letters, 30 , pp. 150–153, 2019. BibTeX @article{kiziltacs2019flavonol,
title = {Flavonol glycosides from Reseda lutea L},
author = {Hatice K{i}z{i}lta ş and Melis Kü ç and Seda Duman and Erdal Bedіr},
year = {2019},
date = {2019-01-01},
journal = {Phytochemistry letters},
volume = {30},
pages = {150--153},
publisher = {Elsevier},
keywords = {},
pubstate = {published},
tppubtype = {article}
}
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Bayazeid, Omer; Bedir, Erdal; Yalcin, Funda N Ligand-based virtual screening and molecular docking of two cytotoxic compounds isolated from Papaver lacerum Journal Article Phytochemistry letters, 30 , pp. 26–30, 2019. BibTeX @article{bayazeid2019ligand,
title = {Ligand-based virtual screening and molecular docking of two cytotoxic compounds isolated from Papaver lacerum},
author = {Omer Bayazeid and Erdal Bedir and Funda N Yalcin},
year = {2019},
date = {2019-01-01},
journal = {Phytochemistry letters},
volume = {30},
pages = {26--30},
publisher = {Elsevier},
keywords = {},
pubstate = {published},
tppubtype = {article}
}
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Incollections
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Gülcemal, Derya; Aslanipour, Behnaz; Bedir, Erdal Secondary Metabolites from Turkish Astragalus Species Incollection Plant and Human Health, Volume 2, pp. 43–97, Springer, 2019. BibTeX @incollection{gulcemal2019secondary,
title = {Secondary Metabolites from Turkish Astragalus Species},
author = {Derya Gülcemal and Behnaz Aslanipour and Erdal Bedir},
year = {2019},
date = {2019-01-01},
booktitle = {Plant and Human Health, Volume 2},
pages = {43--97},
publisher = {Springer},
keywords = {},
pubstate = {published},
tppubtype = {incollection}
}
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